Note This implementation is no longer maintained. A new version in Jax is available in pertpy. For more information and contribution guidelines please visit the ...
A framework for analyzing single-cell genomics data, in which geometrical properties are harnessed to obtain insights on cellular diversity, including precise clustering, clear visualizations, and ...
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We validate r i against Scanpy diffusion pseudotime (DPT, computed from PCA → k NN → diffusion map with k = 15) via Spearman and Kendall rank correlations. Two Euclidean baselines are included for ...
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